STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_08676ATP-dependent RNA helicase SUV3. (673 aa)    
Predicted Functional Partners:
CISG_05819
F-box domain-containing protein.
   
 
 0.917
CISG_06583
Exoribonuclease 2.
   
 
 0.917
CISG_09945
Uncharacterized protein.
   
 
 0.785
CISG_03531
Mitotic control protein dis3; Belongs to the RNR ribonuclease family.
   
 
 0.785
CISG_07371
SSD1 protein.
   
 
 0.785
CISG_06819
tRNA endonuclease.
   
  
 0.771
CISG_00317
ATP-dependent RNA helicase mss116; Belongs to the DEAD box helicase family.
   
 
 0.561
CISG_09268
ATP-dependent RNA helicase DBP6; Belongs to the DEAD box helicase family.
   
 
 0.548
CISG_03415
ATP-dependent RNA helicase fal1.
    
 
 0.495
CISG_01138
Vacuolar protein sorting-associated protein 26B-B.
     
 0.494
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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