STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_09189BFR2 protein. (545 aa)    
Predicted Functional Partners:
CISG_04341
Nucleolar protein 14.
   
 
 0.998
CISG_01462
Uncharacterized protein.
   
 
 0.998
CISG_06355
U3 small nucleolar RNA-associated protein 5.
   
 
 0.997
CISG_08545
Pre-rRNA-processing protein pno1.
   
 
 0.997
CISG_04610
Nucleolar protein 10.
   
 
 0.996
CISG_06944
WD repeat and SOCS box-containing protein 1.
   
 
 0.996
CISG_00136
Nucleolar protein 5A.
   
 
 0.995
CISG_10142
Uncharacterized protein.
   
 
 0.995
CISG_08706
Uncharacterized protein.
   
 
 0.995
CISG_01543
GTP binding protein Bms1.
   
 
 0.995
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.