STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CISG_01627IF3_C domain-containing protein. (290 aa)    
Predicted Functional Partners:
CISG_01905
Translation initiation factor IF-2.
   
 0.702
CISG_09263
MRP-S28 domain-containing protein.
   
 0.580
CISG_05799
Uncharacterized protein.
    
 0.546
CISG_01786
37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
  0.546
CISG_06161
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 0.538
CISG_01477
Eukaryotic translation initiation factor 5B.
   
 0.537
CISG_08577
30S ribosomal protein S10.
   
  0.535
CISG_00145
Uncharacterized protein.
   
  0.532
CISG_09719
Mitochondrial ribosomal protein subunit S18.
    
  0.532
CISG_00869
Mitochondrial 37S ribosomal protein S16.
    
  0.532
Your Current Organism:
Coccidioides immitis RMSCC3703
NCBI taxonomy Id: 454286
Other names: C. immitis RMSCC 3703, Coccidioides immitis RMSCC 3703
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.