STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK57105.1Predicted PurR-regulated permease PerM. (390 aa)    
Predicted Functional Partners:
SFK11170.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
   0.539
SFK40048.1
Osmotically inducible protein OsmC.
  
     0.466
SFK62888.1
Protein of unknown function.
 
     0.458
SFK04209.1
Putative Mg2+ transporter-C (MgtC) family protein.
 
     0.437
SFK68843.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
 
     0.420
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
    
  0.413
SFK44615.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
  0.407
Your Current Organism:
Methylophaga sulfidovorans
NCBI taxonomy Id: 45496
Other names: CIP 105175, DSM 11578, JCM 21498, LMD 95.210, M. sulfidovorans, Methyliphaga sulfidovorans, NBRC 102423, strain RB-1
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