Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFJ76046.1 | SFK06989.1 | SAMN04488079_10199 | SAMN04488079_104219 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.961 |
SFJ76046.1 | SFK14119.1 | SAMN04488079_10199 | SAMN04488079_105192 | Tetratricopeptide repeat-containing protein. | Acetoin utilization deacetylase AcuC. | 0.689 |
SFJ76046.1 | SFK72153.1 | SAMN04488079_10199 | SAMN04488079_12124 | Tetratricopeptide repeat-containing protein. | WD-40 repeat-containing protein. | 0.970 |
SFJ76046.1 | alaS | SAMN04488079_10199 | SAMN04488079_103201 | Tetratricopeptide repeat-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.968 |
SFJ76046.1 | rpoA | SAMN04488079_10199 | SAMN04488079_12628 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.951 |
SFJ76046.1 | rpoZ | SAMN04488079_10199 | SAMN04488079_10145 | Tetratricopeptide repeat-containing protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.939 |
SFK06989.1 | SFJ76046.1 | SAMN04488079_104219 | SAMN04488079_10199 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.961 |
SFK06989.1 | SFK14119.1 | SAMN04488079_104219 | SAMN04488079_105192 | Hypothetical protein. | Acetoin utilization deacetylase AcuC. | 0.886 |
SFK06989.1 | SFK18111.1 | SAMN04488079_104219 | SAMN04488079_10635 | Hypothetical protein. | Ca-activated chloride channel family protein. | 0.961 |
SFK06989.1 | SFK39973.1 | SAMN04488079_104219 | SAMN04488079_11010 | Hypothetical protein. | TIGR03790 family protein. | 0.961 |
SFK06989.1 | SFK71650.1 | SAMN04488079_104219 | SAMN04488079_1214 | Hypothetical protein. | Conserved hypothetical protein. | 0.961 |
SFK06989.1 | SFK72153.1 | SAMN04488079_104219 | SAMN04488079_12124 | Hypothetical protein. | WD-40 repeat-containing protein. | 0.992 |
SFK06989.1 | alaS | SAMN04488079_104219 | SAMN04488079_103201 | Hypothetical protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.779 |
SFK14119.1 | SFJ76046.1 | SAMN04488079_105192 | SAMN04488079_10199 | Acetoin utilization deacetylase AcuC. | Tetratricopeptide repeat-containing protein. | 0.689 |
SFK14119.1 | SFK06989.1 | SAMN04488079_105192 | SAMN04488079_104219 | Acetoin utilization deacetylase AcuC. | Hypothetical protein. | 0.886 |
SFK14119.1 | SFK18111.1 | SAMN04488079_105192 | SAMN04488079_10635 | Acetoin utilization deacetylase AcuC. | Ca-activated chloride channel family protein. | 0.689 |
SFK14119.1 | SFK39973.1 | SAMN04488079_105192 | SAMN04488079_11010 | Acetoin utilization deacetylase AcuC. | TIGR03790 family protein. | 0.689 |
SFK14119.1 | SFK71650.1 | SAMN04488079_105192 | SAMN04488079_1214 | Acetoin utilization deacetylase AcuC. | Conserved hypothetical protein. | 0.726 |
SFK14119.1 | SFK72153.1 | SAMN04488079_105192 | SAMN04488079_12124 | Acetoin utilization deacetylase AcuC. | WD-40 repeat-containing protein. | 0.987 |
SFK18111.1 | SFK06989.1 | SAMN04488079_10635 | SAMN04488079_104219 | Ca-activated chloride channel family protein. | Hypothetical protein. | 0.961 |
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