STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpBNa(+)/H(+) antiporter subunit B. (135 aa)    
Predicted Functional Partners:
mrpC
Na(+)/H(+) antiporter subunit C.
 
 
 0.998
nuoL_2
NADH-quinone oxidoreductase chain L.
 
 
 0.998
mrpE
Na(+)/H(+) antiporter subunit E.
 
 
 0.997
mrpG
Na(+)/H(+) antiporter subunit G.
 
 
 0.997
nuoL_1
NADH-quinone oxidoreductase chain L.
 
 0.996
mrpF
Na(+)/H(+) antiporter subunit F.
 
 
 0.996
Ljam_1655
NADH-ubiquinone oxidoreductase chain 5.
 
 
 0.874
nuoL_3
NADH-quinone oxidoreductase chain L.
 
 
 0.851
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.783
Ljam_0024
Putative sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.502
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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