STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpFNa(+)/H(+) antiporter subunit F. (102 aa)    
Predicted Functional Partners:
nuoL_1
NADH-quinone oxidoreductase chain L.
 
 
 0.998
mrpC
Na(+)/H(+) antiporter subunit C.
 
 
 0.998
mrpE
Na(+)/H(+) antiporter subunit E.
 
 
 0.998
mrpG
Na(+)/H(+) antiporter subunit G.
 
 
 0.998
nuoL_2
NADH-quinone oxidoreductase chain L.
 
 
 0.997
mrpB
Na(+)/H(+) antiporter subunit B.
 
 
 0.992
Ljam_1655
NADH-ubiquinone oxidoreductase chain 5.
 
 
 0.813
nuoL_3
NADH-quinone oxidoreductase chain L.
  
 
 0.785
hisI
Histidine biosynthesis bifunctional protein hisIE (Phosphoribosyl-AMP cyclohydrolase/Phosphoribosyl-ATP pyrophosphatase); In the N-terminal section; belongs to the PRA-CH family.
  
    0.464
Ljam_0024
Putative sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.437
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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