STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0083Hypothetical protein. (260 aa)    
Predicted Functional Partners:
Ljam_0084
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.993
Ljam_0082
Signal peptide protein.
 
  
 0.979
Ljam_0085
Silver efflux pump.
 
     0.914
Ljam_0079
Putative YceI-like family protein; Belongs to the UPF0312 family.
       0.736
ycel
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
       0.736
cybA
Cytochrome b561 transmembrane protein.
       0.708
Ljam_2519
DoxX.
  
  
 0.665
Ljam_1971
Protein with a bacterial immunoglobulin-like domain protein.
   
    0.412
Ljam_1990
Hypothetical protein.
   
    0.412
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.