STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0092SCO1/SenC family transporter protein. (214 aa)    
Predicted Functional Partners:
coxB_2
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.958
resA
Thiol-disulfide oxidoreductase ResA.
 
 
 0.957
Ljam_0090
Cytochrome c oxidase assembly protein.
 
 
 0.953
Ljam_0088
SURF1 family protein.
 
  
 0.916
coxB_1
Cytochrome c oxidase subunit II.
  
 
 0.910
ccmG
Cytochrome C biogenesis protein.
  
 
 0.905
cyoE
Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
  
  
 0.882
Ljam_0089
Hypothetical protein.
 
     0.861
Ljam_2011
Cytochrome c oxidase, assembly transmembrane protein CoxG.
 
 
 0.853
petC
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
  
   
 0.631
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.