STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmPIcmP protein. (377 aa)    
Predicted Functional Partners:
Ljam_0120
Protein IcmO (DotL).
 
 
 
 0.995
Ljam_0129
IcmJ protein.
 
 
 
 0.986
Ljam_0124
IcmK protein.
 
   
 0.890
Ljam_2373
Hypothetical protein.
    
   0.890
Ljam_0123
Protein IcmL (DotI).
 
     0.887
Ljam_0125
Protein IcmE (DotG).
 
   
 0.826
Ljam_0130
Protein IcmB (DotO).
 
   
 0.823
dotC
Defect in organelle trafficking lipoprotein DotC.
 
   
 0.802
Ljam_2155
Substrate of the Dot/Icm secretion system.
    
   0.779
enhA_1
Enhanced entry protein EnhA.
  
     0.758
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.