STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0132IcmF. (974 aa)    
Predicted Functional Partners:
Ljam_0133
IcmH (DotU).
 
 
 0.978
Ljam_0125
Protein IcmE (DotG).
 
   
 0.847
Ljam_1484
Protein LvrA.
  
     0.751
Ljam_1835
Cysteine protease.
  
     0.748
cpxR
Transcriptional regulatory protein CpxR.
      
 0.723
Ljam_1607
Putative membrane protein YdgA-like protein.
  
     0.723
ubiC
4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.
  
     0.699
Ljam_0900
Ectonucleoside triphosphate diphosphohydrolase I.
  
     0.696
Ljam_0850
Protein-tyrosine phosphatase.
  
     0.691
Ljam_0251
DotA.
  
     0.676
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.