STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0136Alkylhydroperoxide reductase, AhpC/TSA family. (179 aa)    
Predicted Functional Partners:
trxB
Thioredoxin reductase.
  
 
 0.973
ahpD
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
  
 0.934
ccmG
Cytochrome C biogenesis protein.
  
 0.932
resA
Thiol-disulfide oxidoreductase ResA.
  
 0.932
fur
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.770
btuE
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.667
Ljam_0196
DNA-binding protein; Belongs to the Dps family.
  
  
 0.628
Ljam_1813
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.614
Ljam_0503
Polyketide synthase.
   
 
 0.576
Ljam_1060
Polyketide synthase.
   
 
 0.576
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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