STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadH2,4-dienoyl-CoA reductase FadH1. (674 aa)    
Predicted Functional Partners:
Ljam_0100
Glutamate synthase; Belongs to the glutamate synthase family.
 
 0.999
Ljam_1855
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.986
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.985
etfB
Electron transfer flavoprotein subunit beta.
  
 
 0.985
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 0.875
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.866
Ljam_1262
Ferredoxin II (4Fe-4S); Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 0.862
Ljam_0503
Polyketide synthase.
  
 
 0.851
Ljam_1060
Polyketide synthase.
  
 
 0.851
trxB
Thioredoxin reductase.
  
 
 0.828
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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