Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadH2,4-dienoyl-CoA reductase FadH1. (674 aa)    
Predicted Functional Partners:
Ljam_0100
Glutamate synthase; Belongs to the glutamate synthase family.
 
 0.996
etfB
Electron transfer flavoprotein subunit beta.
  
 0.989
etfA
Electron transfer flavoprotein subunit alpha.
   
 0.981
Ljam_1675
NADH dehydrogenase I subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 0.968
Ljam_0503
Polyketide synthase.
  
 
 0.963
Ljam_1060
Polyketide synthase.
  
 
 0.963
Ljam_1855
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 0.959
nuoE
NADH dehydrogenase I chain E.
  
 0.942
Ljam_0276
(2Fe-2S) ferredoxin.
   
 0.941
fumB
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.936
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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