STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0196DNA-binding protein; Belongs to the Dps family. (146 aa)    
Predicted Functional Partners:
clpS
Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
   
 
 0.929
osmC
Peroxiredoxin OsmC.
  
  
 0.657
Ljam_0136
Alkylhydroperoxide reductase, AhpC/TSA family.
  
  
 0.628
Ljam_2140
Sigma 54 modulation protein YhbH.
  
  
 0.620
ahpC
Alkyl hydroperoxide reductase.
  
  
 0.616
Ljam_1703
Serine protein kinase.
   
    0.583
Ljam_1429
Trp repressor binding protein; Belongs to the WrbA family.
   
  
 0.576
wrbA
Flavoprotein WrbA (Trp repressor binding protein).
   
  
 0.576
yhbH
Ribosome-associated, sigma 54 modulation protein.
   
    0.572
Ljam_2025
Trehalose-6-phosphate synthase.
   
  
 0.553
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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