Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_0219ABC transporter permease. (374 aa)    
Predicted Functional Partners:
Ljam_0220
ABC transporter ATP binding protein.
 
 0.999
Ljam_0221
ABC transport system periplasmic substrate binding protein.
 
 0.996
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
 0.994
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.993
Ljam_1284
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 0.948
ttg2B
Toluene tolerance protein Ttg2B.
  
  
 
0.916
Ljam_0222
Transport protein.
 
 
  0.912
ttg2D
Toluene tolerance protein Ttg2D.
 
 
 0.911
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
  0.805
Ljam_0218
Hypothetical protein.
       0.745
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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