STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
motA2Flagellar motor protein MotA. (293 aa)    
Predicted Functional Partners:
motB_1
Flagellar motor protein MotB.
 
 0.999
motB_2
Flagellar motor protein MotD.
  
 0.983
Ljam_0772
Chemotaxis histidine kinase.
  
  
 0.944
Ljam_0073
GGDEF domain-containing sensory box protein.
  
  
 0.941
Ljam_1741
Regulatory protein (GGDEF and EAL domains).
  
  
 0.941
flgG
Flagellar basal body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
 
  
 0.917
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.910
Ljam_0477
Muramidase, peptidoglycan hydrolase FlgJ.
 
  
 0.903
flgE
Flagellar hook protein FlgE.
 
  
 0.902
fliG
Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
 
 0.900
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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