Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0332 | ftsK | Ljam_0332 | Ljam_0335 | Naringenin-chalcone synthase. | Cell division protein FtsK. | 0.707 |
| Ljam_0332 | lolA | Ljam_0332 | Ljam_0334 | Naringenin-chalcone synthase. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.707 |
| Ljam_0332 | ycaJ | Ljam_0332 | Ljam_0333 | Naringenin-chalcone synthase. | Recombination protein. | 0.721 |
| Ljam_1844 | Ljam_1845 | Ljam_1844 | Ljam_1845 | ABC transporter ATP binding protein. | ABC transporter permease. | 0.994 |
| Ljam_1844 | lolA | Ljam_1844 | Ljam_0334 | ABC transporter ATP binding protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.842 |
| Ljam_1844 | lolC | Ljam_1844 | Ljam_1078 | ABC transporter ATP binding protein. | Lipoprotein-releasing system transmembrane protein lolC. | 0.947 |
| Ljam_1844 | lolD | Ljam_1844 | Ljam_1077 | ABC transporter ATP binding protein. | ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.589 |
| Ljam_1845 | Ljam_1844 | Ljam_1845 | Ljam_1844 | ABC transporter permease. | ABC transporter ATP binding protein. | 0.994 |
| Ljam_1845 | Ljam_1974 | Ljam_1845 | Ljam_1974 | ABC transporter permease. | ABC transporter ATP-binding protein. | 0.943 |
| Ljam_1845 | lolA | Ljam_1845 | Ljam_0334 | ABC transporter permease. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.879 |
| Ljam_1845 | lolC | Ljam_1845 | Ljam_1078 | ABC transporter permease. | Lipoprotein-releasing system transmembrane protein lolC. | 0.654 |
| Ljam_1845 | lolD | Ljam_1845 | Ljam_1077 | ABC transporter permease. | ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.975 |
| Ljam_1974 | Ljam_1845 | Ljam_1974 | Ljam_1845 | ABC transporter ATP-binding protein. | ABC transporter permease. | 0.943 |
| Ljam_1974 | lolA | Ljam_1974 | Ljam_0334 | ABC transporter ATP-binding protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.842 |
| Ljam_1974 | lolC | Ljam_1974 | Ljam_1078 | ABC transporter ATP-binding protein. | Lipoprotein-releasing system transmembrane protein lolC. | 0.927 |
| Ljam_1974 | lolD | Ljam_1974 | Ljam_1077 | ABC transporter ATP-binding protein. | ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. | 0.483 |
| amiB | ftsK | Ljam_0266 | Ljam_0335 | N-acetylmuramoyl-L-alanine amidase. | Cell division protein FtsK. | 0.410 |
| amiB | lolA | Ljam_0266 | Ljam_0334 | N-acetylmuramoyl-L-alanine amidase. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.890 |
| ftsK | Ljam_0332 | Ljam_0335 | Ljam_0332 | Cell division protein FtsK. | Naringenin-chalcone synthase. | 0.707 |
| ftsK | amiB | Ljam_0335 | Ljam_0266 | Cell division protein FtsK. | N-acetylmuramoyl-L-alanine amidase. | 0.410 |
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