STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0364Hypothetical protein. (613 aa)    
Predicted Functional Partners:
Ljam_2217
Hypothetical protein.
  
     0.774
Ljam_2218
Hypothetical protein.
  
     0.774
Ljam_2296
Cytochrome P450.
  
     0.741
Ljam_0363
Hypothetical protein.
       0.623
Ljam_1924
7-dehydrocholesterol reductase.
  
     0.579
Ljam_2807
(2R)-phospho-3-sulfolactate synthase (ComA).
  
     0.568
Ljam_2515
Serine carboxypeptidase.
  
     0.514
Ljam_2905
Acid phosphatase, class B.
  
     0.485
Ljam_2438
L-gulono-gamma-lactone oxidase.
  
     0.456
Ljam_1125
NAD+-dependent formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.
  
     0.447
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.