Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_0412Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family. (282 aa)    
Predicted Functional Partners:
Ljam_0413
LphB.
 
    0.937
Ljam_0380
Hypothetical protein.
 
  
  0.831
Ljam_0503
Polyketide synthase.
    
 0.799
Ljam_1060
Polyketide synthase.
    
 0.799
Ljam_0381
Hypothetical protein.
 
    0.769
capD
Nucleoside-diphosphate sugar epimerase.
       0.753
Ljam_0411
Substrate of the Dot/Icm secretion system.
       0.710
Ljam_0500
Electron transferring flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
  
 
 0.527
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.510
Ljam_0752
Hypothetical protein.
 
    0.508
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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