Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ljam_0485 | Ljam_0486 | Ljam_0485 | Ljam_0486 | Von Willebrand factor type A domain protein. | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | 0.548 |
Ljam_0485 | Ljam_0487 | Ljam_0485 | Ljam_0487 | Von Willebrand factor type A domain protein. | Hypothetical protein. | 0.457 |
Ljam_0485 | Ljam_2740 | Ljam_0485 | Ljam_2740 | Von Willebrand factor type A domain protein. | Serine metalloprotease; Belongs to the peptidase S8 family. | 0.618 |
Ljam_0486 | Ljam_0485 | Ljam_0486 | Ljam_0485 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Von Willebrand factor type A domain protein. | 0.548 |
Ljam_0486 | Ljam_0487 | Ljam_0486 | Ljam_0487 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Hypothetical protein. | 0.775 |
Ljam_0486 | Ljam_0488 | Ljam_0486 | Ljam_0488 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Hypothetical protein. | 0.586 |
Ljam_0486 | Ljam_0489 | Ljam_0486 | Ljam_0489 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Thaumatin domain-containing protein. | 0.606 |
Ljam_0486 | Ljam_0503 | Ljam_0486 | Ljam_0503 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Polyketide synthase. | 0.577 |
Ljam_0486 | Ljam_1060 | Ljam_0486 | Ljam_1060 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Polyketide synthase. | 0.577 |
Ljam_0486 | Ljam_2740 | Ljam_0486 | Ljam_2740 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Serine metalloprotease; Belongs to the peptidase S8 family. | 0.581 |
Ljam_0486 | egl | Ljam_0486 | Ljam_2691 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.487 |
Ljam_0486 | ftsK | Ljam_0486 | Ljam_0335 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Cell division protein FtsK. | 0.786 |
Ljam_0486 | rtxA-1 | Ljam_0486 | Ljam_0940 | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | Structural toxin protein RtxA. | 0.659 |
Ljam_0487 | Ljam_0485 | Ljam_0487 | Ljam_0485 | Hypothetical protein. | Von Willebrand factor type A domain protein. | 0.457 |
Ljam_0487 | Ljam_0486 | Ljam_0487 | Ljam_0486 | Hypothetical protein. | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | 0.775 |
Ljam_0487 | Ljam_0488 | Ljam_0487 | Ljam_0488 | Hypothetical protein. | Hypothetical protein. | 0.610 |
Ljam_0487 | Ljam_0489 | Ljam_0487 | Ljam_0489 | Hypothetical protein. | Thaumatin domain-containing protein. | 0.579 |
Ljam_0488 | Ljam_0486 | Ljam_0488 | Ljam_0486 | Hypothetical protein. | Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein. | 0.586 |
Ljam_0488 | Ljam_0487 | Ljam_0488 | Ljam_0487 | Hypothetical protein. | Hypothetical protein. | 0.610 |
Ljam_0488 | Ljam_0489 | Ljam_0488 | Ljam_0489 | Hypothetical protein. | Thaumatin domain-containing protein. | 0.766 |
page 1 of 3