Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_0540FtsX-like permease family protein. (829 aa)    
Predicted Functional Partners:
Ljam_0539
ABC transporter ATP-binding protein.
 
 
 
 0.987
tesA
Esterase TesA precursor.
 
 
   0.984
lolD
ABC transporter ATP binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
  
 
 0.615
Ljam_0541
Transmembrane protein.
       0.532
Ljam_1975
ABC transporter permease.
  
 
  0.531
Ljam_1844
ABC transporter ATP binding protein.
  
 
 0.450
Ljam_1974
ABC transporter ATP-binding protein.
  
 
 0.450
Ljam_1845
ABC transporter permease.
 
  
  0.440
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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