STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0596(2-pyrone-4,6-)dicarboxylic acid hydrolase. (255 aa)    
Predicted Functional Partners:
iolG
Myo-inositol-2-dehydrogenase.
  
 
 0.722
Ljam_1724
5-carboxyvanillate decarboxylase.
 
  
 0.633
gltA
Citrate synthase; Belongs to the citrate synthase family.
       0.537
Ljam_0835
Oxidoreductase.
    
 0.531
Ljam_0503
Polyketide synthase.
    
 0.512
Ljam_1060
Polyketide synthase.
    
 0.512
Ljam_2493
FAD dependent oxidoreductase.
  
  
  0.509
Ljam_2089
FAD dependent oxidoreductase.
  
  
  0.508
Ljam_1758
Aldo/keto reductase.
  
 
 0.500
yccX
Acylphosphatase.
     
  0.486
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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