Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
arp_1Ankyrin repeat protein. (738 aa)    
Predicted Functional Partners:
Ljam_0503
Polyketide synthase.
 
 0.961
Ljam_1060
Polyketide synthase.
 
 0.961
Ljam_0664
Lipoprotein NlpI.
 
 0.939
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.873
Ljam_1152
Chaperone protein DnaJ.
  
 
 0.863
hdaH
Histone deacetylase-like amidohydrolase.
  
 
  0.860
Ljam_0899
Ankyrin repeat protein.
  
 
 0.860
yjeA
Endo-1,4-beta-xylanase-like protein.
   
 0.859
legL6
Leucine-rich repeat-containing protein.
    
  0.845
Ljam_1114
Ankyrin repeat-containing protein.
   
 0.840
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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