Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ywtG_1D-xylose proton symporter. (430 aa)    
Predicted Functional Partners:
Ljam_0720
phytanoyl-CoA dioxygenase.
 
     0.834
Ljam_0719
HD domain protein.
       0.768
Ljam_0658
Proline betaine transport protein like protein.
  
     0.526
Ljam_0341
Proline betaine transport protein like protein.
  
     0.519
Ljam_0722
Hypothetical protein.
       0.497
Ljam_0485
Von Willebrand factor type A domain protein.
  
     0.462
treF
Alpha,alpha-trehalase.
 
     0.460
Ljam_2724
Proline betaine transport protein like protein.
  
     0.459
Ljam_0718
GGDEF domain-containing protein.
       0.453
Ljam_1481
Proline/betaine transporter ProP6.
  
     0.431
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.