Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_0726Glucoamylase. (426 aa)    
Predicted Functional Partners:
Ljam_2025
Trehalose-6-phosphate synthase.
    
 0.856
Ljam_1709
Aminopeptidase.
  
     0.734
glk
Glucokinase; Belongs to the bacterial glucokinase family.
    
 0.648
Ljam_1185
Glutamine amidotransferase.
  
     0.616
Ljam_0485
Von Willebrand factor type A domain protein.
  
     0.614
lapB
Tetratricopeptide repeat protein; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.
      
 0.609
treF
Alpha,alpha-trehalase.
  
  
  0.606
Ljam_1032
O-Antigen ligase.
  
     0.571
Ljam_0408
Chitinase.
  
    0.565
Ljam_2740
Serine metalloprotease; Belongs to the peptidase S8 family.
  
   
 0.546
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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