STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0736Putative Heparan-alpha-glucosaminide N-acetyltransferase. (368 aa)    
Predicted Functional Partners:
Ljam_2809
Alkaline phosphatase.
  
  
  0.643
Ljam_0735
Radical SAM superfamily protein.
       0.616
Ljam_0737
Hypothetical protein.
       0.585
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
    0.452
Ljam_2276
Putative Sulfatase.
  
  
  0.449
ywtG_2
D-xylose (galactose, arabinose)-proton symporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.444
Ljam_2418
Major Facilitator Superfamily protein.
  
     0.438
Ljam_2609
Hypothetical protein.
  
  
  0.416
Ljam_0738
Ninein.
       0.412
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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