Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0413 | Ljam_0795 | Ljam_0413 | Ljam_0795 | LphB. | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.557 |
| Ljam_0413 | Ljam_1124 | Ljam_0413 | Ljam_1124 | LphB. | Coiled-coil protein. | 0.769 |
| Ljam_0413 | Ljam_1217 | Ljam_0413 | Ljam_1217 | LphB. | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.476 |
| Ljam_0413 | Ljam_1560 | Ljam_0413 | Ljam_1560 | LphB. | Hypothetical protein. | 0.765 |
| Ljam_0413 | Ljam_2038 | Ljam_0413 | Ljam_2038 | LphB. | Hypothetical protein. | 0.766 |
| Ljam_0413 | iraA | Ljam_0413 | Ljam_1023 | LphB. | Small-molecule methyltransferase IraA. | 0.770 |
| Ljam_0795 | Ljam_0413 | Ljam_0795 | Ljam_0413 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | LphB. | 0.557 |
| Ljam_0795 | Ljam_0842 | Ljam_0795 | Ljam_0842 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein. | 0.560 |
| Ljam_0795 | Ljam_1124 | Ljam_0795 | Ljam_1124 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Coiled-coil protein. | 0.629 |
| Ljam_0795 | Ljam_1217 | Ljam_0795 | Ljam_1217 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.541 |
| Ljam_0795 | Ljam_1560 | Ljam_0795 | Ljam_1560 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein. | 0.626 |
| Ljam_0795 | Ljam_2038 | Ljam_0795 | Ljam_2038 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein. | 0.577 |
| Ljam_0795 | dam | Ljam_0795 | Ljam_1382 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | DNA adenine methylase. | 0.589 |
| Ljam_0795 | iraA | Ljam_0795 | Ljam_1023 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Small-molecule methyltransferase IraA. | 0.612 |
| Ljam_0795 | mutH | Ljam_0795 | Ljam_2472 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.643 |
| Ljam_0795 | tolA | Ljam_0795 | Ljam_2358 | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | TolA colicin import membrane protein. | 0.629 |
| Ljam_0842 | Ljam_0795 | Ljam_0842 | Ljam_0795 | Hypothetical protein. | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.560 |
| Ljam_0842 | mutH | Ljam_0842 | Ljam_2472 | Hypothetical protein. | DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.453 |
| Ljam_1124 | Ljam_0413 | Ljam_1124 | Ljam_0413 | Coiled-coil protein. | LphB. | 0.769 |
| Ljam_1124 | Ljam_0795 | Ljam_1124 | Ljam_0795 | Coiled-coil protein. | ProQ-like, activator of ProP osmoprotectant transporter; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.629 |
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