STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0828Glyoxalase-like domain protein. (151 aa)    
Predicted Functional Partners:
Ljam_0827
Transporter of the major facilitator superfamily (MFS).
 
  
  0.788
Ljam_0444
Glyoxalase/bleomycin resistance protein.
 
 
 0.642
Ljam_2702
Alanine racemase.
  
  
  0.608
Ljam_2679
D-xylose reductase III.
  
 
  0.603
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.565
Ljam_1837
Intracellular protease, ThiJ/PfpI family.
   
 
  0.564
Ljam_2925
Glyoxylase.
  
 
 0.554
Ljam_0365
Glyoxalase/bleomycin resistance protein/dioxygenase.
 
  
  0.498
Ljam_1569
AraC family transcriptional regulator.
 
    0.435
Ljam_0826
POT family transporter protein proton/peptide symporter.
  
    0.418
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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