Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Ljam_0835Oxidoreductase. (333 aa)    
Predicted Functional Partners:
lpxB
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
  
  0.934
Ljam_0606
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.837
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.717
fis_1
DNA-binding protein fis; Belongs to the transcriptional regulatory Fis family.
       0.706
lysU
Lysine tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.693
Ljam_1007
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.693
capL_1
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.637
capL_2
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.637
Ljam_1000
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.617
Ljam_0503
Polyketide synthase.
  
 
 0.595
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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