STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_0907Rho GTPase (Miro-like). (376 aa)    
Predicted Functional Partners:
legL6
Leucine-rich repeat-containing protein.
    
 0.869
Ljam_1996
Ankyrin repeats (3 copies).
  
 
  0.856
Ljam_2209
Ankyrin repeat-containing protein.
  
 
  0.811
Ljam_1184
cNMP binding domain-containing protein.
  
 
  0.795
Ljam_2499
Conserved protein of unknown function [ankyrin repeat].
  
 
  0.788
smc_3
Chromosome partition protein Smc.
  
     0.765
Ljam_2078
Hypothetical protein.
  
     0.761
Ljam_1181
EPTP domain protein.
  
     0.760
Ljam_1924
7-dehydrocholesterol reductase.
  
 
  0.758
htpG
Class III heat-shock protein HtpG(molecular chaperone); Molecular chaperone. Has ATPase activity.
   
 0.753
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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