Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acdAShort chain-specific acyl CoA dehydrogenase. (384 aa)    
Predicted Functional Partners:
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.966
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase protein.
  
 0.960
Ljam_0911
3-hydroxyisobutyryl-CoA hydrolase.
 
 0.957
Ljam_0910
Enoyl-CoA hydratase/carnithine racemase.
 
  0.948
etfA
Electron transfer flavoprotein subunit alpha.
 
 0.932
Ljam_0503
Polyketide synthase.
  
 0.922
Ljam_1060
Polyketide synthase.
  
 0.922
etfB
Electron transfer flavoprotein subunit beta.
 
 
 0.816
Ljam_2842
enoyl-CoA hydratase.
  
 0.737
recQ
ATP-dependent DNA helicase RecQ.
   
   0.722
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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