Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
Ljam_1006LPS O-antigen length regulator. (325 aa)    
Predicted Functional Partners:
Ljam_1010
Glycosyltransferase, group 1 family.
  
  
 0.861
wecB_2
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.782
Ljam_1005
Hypothetical protein.
       0.773
epsL
Putative sugar transferase EpsL.
  
  
 0.758
capL_1
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.732
Ljam_1007
Aminotransferase WecE; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.719
iolG
Myo-inositol-2-dehydrogenase.
  
    0.693
capL_2
Protein capL; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.677
Ljam_1008
Chloramphenicol acetyltransferase.
       0.660
Ljam_1011
Heparinase II/III-like protein.
       0.660
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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