Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_1065Hypothetical protein. (240 aa)    
Predicted Functional Partners:
ugpQ
Glycerophosphodiester phosphodiesterase, cytosolic.
       0.866
ugpB
Glycerol-3-phosphate binding periplasmic protein.
       0.789
Ljam_1066
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.657
Ljam_1067
SAM-dependent O-methyltransferase.
       0.621
lly
4-hydroxyphenylpyruvate dioxygenase.
       0.571
Ljam_1062
Lipase.
       0.545
Ljam_1069
Fumarylacetoacetate hydrolase.
       0.539
Ljam_1070
Glutathione S-transferase (maleylacetoacetate isomerase).
       0.539
Ljam_2647
Putative lipase.
       0.434
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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