STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1122Hypothetical protein. (314 aa)    
Predicted Functional Partners:
Ljam_2512
Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
  
  
 0.932
Ljam_2698
tRNA-specific 2-thiouridylase MnmA.
 
     0.677
Ljam_1121
Hypothetical protein.
       0.536
Ljam_2025
Trehalose-6-phosphate synthase.
   
    0.512
Ljam_0778
Cyclopropane fatty acid synthase.
     
 0.511
Ljam_0838
Transcriptional regulator.
     
 0.511
Ljam_1123
Hypothetical protein.
       0.493
Ljam_0598
Purine nucleoside phosphorylase II.
   
 
  0.471
Ljam_1220
Deoxyguanosinetriphosphate triphosphohydrolase; Belongs to the dGTPase family. Type 2 subfamily.
    
  0.463
Ljam_1120
Hypothetical protein.
       0.454
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.