STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1127Ras family GTPase. (400 aa)    
Predicted Functional Partners:
Ljam_2829
Rho GTPase (Miro-like).
  
     0.774
Ljam_1202
Rho GTPase (Miro-like).
  
     0.773
Ljam_2340
Protein phosphatase 2C.
  
     0.756
Ljam_0900
Ectonucleoside triphosphate diphosphohydrolase I.
  
     0.694
Ljam_1886
Regulator of chromosome condensation (RCC1) repeat protein.
  
     0.672
Ljam_1246
Ankyrin repeats (3 copies).
  
     0.666
Ljam_1444
Regulator of chromosome condensation (RCC1) repeat protein.
  
     0.660
legL1_1
Gala protein type 1, 3 or 4.
  
     0.625
Ljam_0716
Serine/threonine protein kinase.
  
     0.587
Ljam_1885
Protein kinase domain protein.
  
     0.587
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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