Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_1176Hemolysin D. (334 aa)    
Predicted Functional Partners:
Ljam_1175
P-hydroxybenzoic acid efflux subunit AaeB.
 
  
 0.811
Ljam_2850
Outer membrane efflux lipoprotein.
 
 0.726
Ljam_2848
Multidrug resistance protein, MFS superfamily.
  
   0.725
Ljam_2926
Outer membrane efflux protein.
 
 0.669
Ljam_2927
RND multidrug efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.605
Ljam_2865
Outer membrane protein TolC.
 
 0.590
Ljam_2485
Hemolysin D.
  
     0.566
Ljam_1975
ABC transporter permease.
  
  
 0.520
sfcA_2
Malate dehydrogenase.
       0.517
acrA
RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.513
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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