STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1246Ankyrin repeats (3 copies). (942 aa)    
Predicted Functional Partners:
arp_1
Ankyrin repeat protein.
  
 
   0.745
Ljam_1764
Ankyrin.
  
 
   0.728
arp_2
Ankyrin repeat protein.
  
 
   0.680
Ljam_0791
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.678
Ljam_2340
Protein phosphatase 2C.
  
     0.669
Ljam_1127
Ras family GTPase.
  
     0.666
legL1_1
Gala protein type 1, 3 or 4.
  
     0.621
arp_4
Ankyrin repeat protein.
  
     0.608
legL1_2
Gala protein type 1, 3 or 4.
  
     0.594
arp_3
Ankyrin repeat protein.
  
     0.593
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.