pilA protein (Legionella jamestowniensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pilA

Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family. (135 aa)

Predicted Functional Partners:

pilQ

0.812

pilE

0.742

bolA

0.639

Ljam_1250

0.621

asd

0.609

pilM

0.540

Ljam_2419

0.508

pilN

0.505

Ljam_0846

0.491

pilB

0.452

Your Current Organism:

Legionella jamestowniensis

NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ljam_0846	Ljam_2419	Ljam_0846	Ljam_2419	General secretion pathway protein LspH.	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.731
Ljam_0846	pilA	Ljam_0846	Ljam_1247	General secretion pathway protein LspH.	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	0.491
Ljam_0846	pilB	Ljam_0846	Ljam_2421	General secretion pathway protein LspH.	Pilus assembly protein PilB.	0.784
Ljam_0846	pilQ	Ljam_0846	Ljam_1343	General secretion pathway protein LspH.	Type IV pilus (Tfp) assembly protein PilQ.	0.413
Ljam_1250	bolA	Ljam_1250	Ljam_1249	Hypothetical protein.	Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family.	0.866
Ljam_1250	pilA	Ljam_1250	Ljam_1247	Hypothetical protein.	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	0.621
Ljam_2419	Ljam_0846	Ljam_2419	Ljam_0846	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	General secretion pathway protein LspH.	0.731
Ljam_2419	pilA	Ljam_2419	Ljam_1247	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	0.508
Ljam_2419	pilB	Ljam_2419	Ljam_2421	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Pilus assembly protein PilB.	0.990
Ljam_2419	pilE	Ljam_2419	Ljam_1329	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Type-IV pilin.	0.606
Ljam_2419	pilM	Ljam_2419	Ljam_1347	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Tfp pilus assembly protein, ATPase PilM.	0.823
Ljam_2419	pilN	Ljam_2419	Ljam_1346	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Tfp pilus assembly protein PilN.	0.609
Ljam_2419	pilQ	Ljam_2419	Ljam_1343	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	Type IV pilus (Tfp) assembly protein PilQ.	0.812
asd	pilA	Ljam_2789	Ljam_1247	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	0.609
bolA	Ljam_1250	Ljam_1249	Ljam_1250	Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family.	Hypothetical protein.	0.866
bolA	pilA	Ljam_1249	Ljam_1247	Regulator of penicillin binding proteins and beta lactamase transcription (morphogene); Belongs to the BolA/IbaG family.	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	0.639
pilA	Ljam_0846	Ljam_1247	Ljam_0846	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	General secretion pathway protein LspH.	0.491
pilA	Ljam_1250	Ljam_1247	Ljam_1250	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	Hypothetical protein.	0.621
pilA	Ljam_2419	Ljam_1247	Ljam_2419	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.	0.508
pilA	asd	Ljam_1247	Ljam_2789	Type IV pilus assembly protein PilA; Belongs to the N-Me-Phe pilin family.	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.	0.609

page 1 of 3

Server load: low (20%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About