STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1274Hypothetical protein. (97 aa)    
Predicted Functional Partners:
Ljam_1273
N-acetyltransferase GCN5.
 
     0.951
Ljam_1272
Hypothetical protein.
       0.773
Ljam_0433
GNAT family acetyltransferase.
 
 
   0.658
Ljam_0144
Hydrolase.
   
   0.589
rimI
GCN5-related N-acetyltransferase.
   
   0.587
Ljam_0665
GNAT family acetyltransferase.
   
   0.587
Ljam_0707
GNAT family acetyltransferase.
   
   0.587
Ljam_1815
Acetyltransferase (GNAT) family protein.
   
   0.587
Ljam_2068
Hypothetical protein; N-terminal GNAT family acetyltransferase.
   
   0.587
Ljam_2715
GNAT family acetyltransferase.
   
   0.587
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.