Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_1281Putative NIF3-like protein 1. (252 aa)    
Predicted Functional Partners:
Ljam_1283
BolA like protein; Belongs to the BolA/IbaG family.
 
     0.890
ttg2B
Toluene tolerance protein Ttg2B.
 
     0.884
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
     0.882
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.866
Ljam_1284
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
       0.860
ttg2D
Toluene tolerance protein Ttg2D.
       0.860
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
       0.860
Ljam_0664
Lipoprotein NlpI.
  
    0.786
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.690
Ljam_1294
ABC transporter ATP binding protein.
 
    0.667
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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