Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lspD | lspE | Ljam_0573 | Ljam_0572 | Type II protein secretion LspD. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.969 |
| lspD | lspF | Ljam_0573 | Ljam_0844 | Type II protein secretion LspD. | Type II secretory pathway protein LspF. | 0.882 |
| lspD | pilB | Ljam_0573 | Ljam_2421 | Type II protein secretion LspD. | Pilus assembly protein PilB. | 0.446 |
| lspD | pilC | Ljam_0573 | Ljam_2420 | Type II protein secretion LspD. | Pilus assembly protein PilC. | 0.451 |
| lspD | pilQ | Ljam_0573 | Ljam_1343 | Type II protein secretion LspD. | Type IV pilus (Tfp) assembly protein PilQ. | 0.701 |
| lspE | lspD | Ljam_0572 | Ljam_0573 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type II protein secretion LspD. | 0.969 |
| lspE | lspF | Ljam_0572 | Ljam_0844 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type II secretory pathway protein LspF. | 0.978 |
| lspE | pilC | Ljam_0572 | Ljam_2420 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Pilus assembly protein PilC. | 0.958 |
| lspE | pilM | Ljam_0572 | Ljam_1347 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein, ATPase PilM. | 0.567 |
| lspE | pilN | Ljam_0572 | Ljam_1346 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein PilN. | 0.849 |
| lspE | pilO | Ljam_0572 | Ljam_1345 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein PilO. | 0.510 |
| lspE | pilP | Ljam_0572 | Ljam_1344 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein PilP. | 0.488 |
| lspE | pilQ | Ljam_0572 | Ljam_1343 | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type IV pilus (Tfp) assembly protein PilQ. | 0.694 |
| lspF | lspD | Ljam_0844 | Ljam_0573 | Type II secretory pathway protein LspF. | Type II protein secretion LspD. | 0.882 |
| lspF | lspE | Ljam_0844 | Ljam_0572 | Type II secretory pathway protein LspF. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.978 |
| lspF | pilB | Ljam_0844 | Ljam_2421 | Type II secretory pathway protein LspF. | Pilus assembly protein PilB. | 0.968 |
| lspF | pilM | Ljam_0844 | Ljam_1347 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein, ATPase PilM. | 0.575 |
| lspF | pilN | Ljam_0844 | Ljam_1346 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein PilN. | 0.508 |
| lspF | pilO | Ljam_0844 | Ljam_1345 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein PilO. | 0.508 |
| lspF | pilP | Ljam_0844 | Ljam_1344 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein PilP. | 0.488 |
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