Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_1217 | pilB | Ljam_1217 | Ljam_2421 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Pilus assembly protein PilB. | 0.925 |
| Ljam_1217 | pilM | Ljam_1217 | Ljam_1347 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein, ATPase PilM. | 0.602 |
| Ljam_1217 | pilN | Ljam_1217 | Ljam_1346 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Tfp pilus assembly protein PilN. | 0.568 |
| Ljam_2419 | lspF | Ljam_2419 | Ljam_0844 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspF. | 0.885 |
| Ljam_2419 | pilB | Ljam_2419 | Ljam_2421 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilB. | 0.978 |
| Ljam_2419 | pilC | Ljam_2419 | Ljam_2420 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilC. | 0.976 |
| Ljam_2419 | pilE | Ljam_2419 | Ljam_1329 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type-IV pilin. | 0.416 |
| Ljam_2419 | pilM | Ljam_2419 | Ljam_1347 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein, ATPase PilM. | 0.703 |
| Ljam_2419 | pilN | Ljam_2419 | Ljam_1346 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein PilN. | 0.489 |
| Ljam_2419 | pilO | Ljam_2419 | Ljam_1345 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein PilO. | 0.518 |
| Ljam_2419 | pilQ | Ljam_2419 | Ljam_1343 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type IV pilus (Tfp) assembly protein PilQ. | 0.684 |
| lspF | Ljam_2419 | Ljam_0844 | Ljam_2419 | Type II secretory pathway protein LspF. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.885 |
| lspF | pilB | Ljam_0844 | Ljam_2421 | Type II secretory pathway protein LspF. | Pilus assembly protein PilB. | 0.968 |
| lspF | pilM | Ljam_0844 | Ljam_1347 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein, ATPase PilM. | 0.575 |
| lspF | pilN | Ljam_0844 | Ljam_1346 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein PilN. | 0.508 |
| lspF | pilO | Ljam_0844 | Ljam_1345 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein PilO. | 0.508 |
| lspF | pilP | Ljam_0844 | Ljam_1344 | Type II secretory pathway protein LspF. | Tfp pilus assembly protein PilP. | 0.488 |
| lspF | pilQ | Ljam_0844 | Ljam_1343 | Type II secretory pathway protein LspF. | Type IV pilus (Tfp) assembly protein PilQ. | 0.711 |
| pilB | Ljam_1217 | Ljam_2421 | Ljam_1217 | Pilus assembly protein PilB. | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.925 |
| pilB | Ljam_2419 | Ljam_2421 | Ljam_2419 | Pilus assembly protein PilB. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.978 |
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