STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1380Tryptophan/tyrosine permease. (398 aa)    
Predicted Functional Partners:
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
  0.643
Ljam_2478
Sphingosine-1-phosphate lyase I.
     
 0.631
Ljam_1379
Tyrosine-specific transport protein.
 
    
0.611
Ljam_0129
IcmJ protein.
  
     0.609
Ljam_0120
Protein IcmO (DotL).
  
     0.602
Ljam_1378
Outer membrane protein, OmpA family protein.
  
    0.563
Ljam_0123
Protein IcmL (DotI).
  
     0.556
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.555
Ljam_1924
7-dehydrocholesterol reductase.
  
 
   0.538
enhA_4
Enhanced entry protein EnhA.
  
     0.511
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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