STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysN2-aminoadipate transaminase. (387 aa)    
Predicted Functional Partners:
pheA
P-protein.
    
 0.823
Ljam_1453
FMN-dependent dehydrogenase.
  
 
 0.801
Ljam_0503
Polyketide synthase.
    
 0.795
Ljam_1060
Polyketide synthase.
    
 0.795
trpE
Anthranilate synthase.
   
 
 0.785
Ljam_1452
4-hydroxyphenylpyruvate dioxygenase.
  
 
  0.760
Ljam_1460
Polyketide synthase.
   
 
 0.710
Ljam_1149
Peptide synthetase, non-ribosomal; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.665
Ljam_1456
Peptide synthetase, non-ribosomal.
   
 
 0.665
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
 
 0.648
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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