Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Ljam_14524-hydroxyphenylpyruvate dioxygenase. (343 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.967
Ljam_2884
Phenylalanine-4-hydroxylase.
 
  
 0.861
Ljam_1453
FMN-dependent dehydrogenase.
  
 
  0.857
Ljam_0503
Polyketide synthase.
   
 0.793
Ljam_1060
Polyketide synthase.
   
 0.793
Ljam_1070
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.780
Ljam_2843
Acetyl/propionyl-CoA carboxylase, beta subunit.
  
 
 0.755
lysN
2-aminoadipate transaminase.
  
 
  0.748
Ljam_1190
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.707
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.694
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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