Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ljam_0714 | Ljam_1595 | Ljam_0714 | Ljam_1595 | Esterase. | Putative Polyhydroxyalkanoate synthesis repressor PhaR. | 0.535 |
| Ljam_0714 | phbC_1 | Ljam_0714 | Ljam_1527 | Esterase. | Polyhydroxyalkanoic synthase. | 0.707 |
| Ljam_1595 | Ljam_0714 | Ljam_1595 | Ljam_0714 | Putative Polyhydroxyalkanoate synthesis repressor PhaR. | Esterase. | 0.535 |
| Ljam_1595 | Ljam_1597 | Ljam_1595 | Ljam_1597 | Putative Polyhydroxyalkanoate synthesis repressor PhaR. | Acetyoacetyl CoA reductase. | 0.672 |
| Ljam_1595 | phaB2 | Ljam_1595 | Ljam_1596 | Putative Polyhydroxyalkanoate synthesis repressor PhaR. | Acetyoacetyl CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.674 |
| Ljam_1595 | phbC_1 | Ljam_1595 | Ljam_1527 | Putative Polyhydroxyalkanoate synthesis repressor PhaR. | Polyhydroxyalkanoic synthase. | 0.771 |
| Ljam_1597 | Ljam_1595 | Ljam_1597 | Ljam_1595 | Acetyoacetyl CoA reductase. | Putative Polyhydroxyalkanoate synthesis repressor PhaR. | 0.672 |
| Ljam_1597 | fadB | Ljam_1597 | Ljam_0858 | Acetyoacetyl CoA reductase. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein. | 0.680 |
| Ljam_1597 | phaB2 | Ljam_1597 | Ljam_1596 | Acetyoacetyl CoA reductase. | Acetyoacetyl CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.876 |
| Ljam_1597 | phbC_1 | Ljam_1597 | Ljam_1527 | Acetyoacetyl CoA reductase. | Polyhydroxyalkanoic synthase. | 0.594 |
| Ljam_1597 | pta_1 | Ljam_1597 | Ljam_0048 | Acetyoacetyl CoA reductase. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.663 |
| Ljam_1597 | pta_2 | Ljam_1597 | Ljam_1528 | Acetyoacetyl CoA reductase. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.663 |
| Ljam_1597 | yfcX | Ljam_1597 | Ljam_0647 | Acetyoacetyl CoA reductase. | Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.680 |
| ack_2 | fabI_2 | Ljam_1529 | Ljam_1530 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | enoyl-ACP reductase. | 0.827 |
| ack_2 | fadB | Ljam_1529 | Ljam_0858 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 3-hydroxyacyl CoA dehydrogenase oxidoreductase protein. | 0.430 |
| ack_2 | phbC_1 | Ljam_1529 | Ljam_1527 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Polyhydroxyalkanoic synthase. | 0.781 |
| ack_2 | pta_1 | Ljam_1529 | Ljam_0048 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.983 |
| ack_2 | pta_2 | Ljam_1529 | Ljam_1528 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase. | 0.995 |
| ack_2 | yfcX | Ljam_1529 | Ljam_0647 | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.430 |
| fabI_2 | ack_2 | Ljam_1530 | Ljam_1529 | enoyl-ACP reductase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.827 |
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