STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1543Chitinase domain protein. (333 aa)    
Predicted Functional Partners:
Ljam_1157
Chitinase.
  
  
 0.756
Ljam_0408
Chitinase.
 
 
 0.725
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.668
egl
Endoglucanase precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.650
Ljam_2790
Putative Smr domain protein.
     
 0.627
cpbD
Chitin-binding protein CbpD.
 
  
 0.620
ugd
UDP-glucose 6-dehydrogenase.
    
  0.606
Ljam_0436
Glycosyl hydrolase.
     
 0.562
Ljam_1941
N-acetyl-beta-glucosaminidase.
     
 0.562
Ljam_2717
Hypothetical protein.
     
 0.525
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.