STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1703Serine protein kinase. (643 aa)    
Predicted Functional Partners:
Ljam_1704
Stress response UPF0229 protein YhbH; Belongs to the UPF0229 family.
 
  
 0.994
spo
SpoVR family protein.
 
  
 0.994
Ljam_2025
Trehalose-6-phosphate synthase.
   
    0.927
Ljam_2679
D-xylose reductase III.
   
    0.708
Ljam_0196
DNA-binding protein; Belongs to the Dps family.
   
    0.583
pepN
Aminopeptidase.
       0.562
Ljam_1066
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
    0.487
phoH
Phosphate starvation inducible protein PhnH.
   
  
 0.468
osmC
Peroxiredoxin OsmC.
   
    0.433
Ljam_1429
Trp repressor binding protein; Belongs to the WrbA family.
   
    0.407
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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