STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1783KQDN repeat-containing protein. (559 aa)    
Predicted Functional Partners:
Ljam_1788
Hypothetical protein.
 
  
 0.973
Ljam_1785
Hypothetical protein.
 
 
 0.966
Ljam_1784
TPR repeat containing protein.
 
 
 0.963
Ljam_1786
Hypothetical protein.
 
   
 0.959
Ljam_1787
Hypothetical protein.
 
   
 0.956
moxR
Methanol dehydrogenase regulatory protein.
 
  
 0.937
ribA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.710
Ljam_2058
Serine/threonine protein kinase.
    
  0.679
Ljam_0775
Methyltransferase involved in chemotaxis (CheR domain).
    
 0.567
Ljam_0059
Hypothetical protein.
  
     0.496
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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