STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ljam_1840Hypothetical protein; Belongs to the UPF0145 family. (407 aa)    
Predicted Functional Partners:
Ljam_0668
lvrA.
  
     0.735
traI
TraI protein.
  
     0.733
Ljam_0692
Hypothetical protein.
  
     0.729
Ljam_0674
Hypothetical protein.
  
     0.727
Ljam_0682
Membrane protein.
  
     0.724
Ljam_0680
Hypothetical protein.
  
     0.716
lvrA
Legionella vir region protein.
  
     0.716
Ljam_0673
Bile acid beta-glucosidase.
  
     0.710
Ljam_0683
Hypothetical protein.
  
     0.706
Ljam_2541
Hypothetical protein.
  
     0.706
Your Current Organism:
Legionella jamestowniensis
NCBI taxonomy Id: 455
Other names: ATCC 35298, CCUG 29669, CIP 103845, DSM 19215, JCM 7590, L. jamestowniensis, Legionella jamestownensis, NCTC 11981, strain JA-26-G1-E2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.